Multiple sequence alignment (MSA) is a cornerstone of computational biology, facilitating the exploration of functional, structural and evolutionary relationships among biological sequences.

Predicting which proteins bind to each other, or protein-protein interactions, has been a challenge for methods based in computational biology. One of the reasons is primarily due to the vast ...

Designing de novo proteins holds immense potential for achieving superior combinations of novel functions and mechanical properties, thereby advancing biological and engineering applications. However, ...