To our knowledge, only one paper has reported mapping and analysis of colocalized ensembles without introducing a generalizable workflow (Roy et al., 2022). Thus far, there have been scant accessible ...

phylogenetic-based orthology analysis (OA) to compare the proteomes of pathogenic to humans (HP) and non-pathogenic to humans (NHP) bacterial strains across 734 strains from 514 species and 91 ...

This approach streamlines the workflow, enhances efficiency ... “By delivering whole genome x whole genome analysis, MRDVision marks a paradigm shift in minimal residual detection,” said ...

Learn important statistical and bioinformatics concepts for analysing molecular data, including good practices in programming and data analysis. Have knowledge of the specific statistical challenges ...

DNA was extracted from the fecal material. For phylogenetic analysis the seven variable regions of the 16S rRNA gene were amplified and sequenced. Metagenomic analysis was performed as well. Average ...

GToTree is a more structured implementation of a workflow I would put together everytime I wanted to make a large-scale phylogenomic tree. What do I mean by large-scale? Anything from a full-blown ...

While the presence of the histone reader domains was previously known, the phylogenetic analysis of these domains performed here establishing their insertion through convergent evolution is important, ...

PRONAME is an open-source bioinformatics pipeline that allows processing Nanopore ... A tutorial detailing the whole workflow is also presented below. The Nanopore sequencing data to import into ...

The gene expression profiling workflow. The RNA sequencer ... of those genes/proteins (such as phylogenetic or physiochemical analyses). Most of the currently available DGE analysis tools do not ...