Despite reporting over 4,400 confirmed cases of mpox as of 27th June 2025, Sierra Leone has performed genomic characterization on only approximately 2.5% of these cases (108 sequences), representing a ...

Phylogenetic analysis and multiple sequence alignment (MSA) are closely related bioinformatics fields. Phylogenetic analysis makes extensive use of MSA in the construction of phylogenetic trees, which ...

We thus propose a multi-agent system built on small language models, fine-tuned on bioinformatics data, and enhanced with retrieval augmented generation (RAG). Our system, BioAgents, enables local ...

A new computational tool improves the analysis of genetic data, making it easier and faster to study the evolutionary relationships between species.

Bayesian inference has been widely applied for phylogenetic and phyloinformatic analysis in recent years. In this paper we build up a high performance computing platform using OpenMPI with free-cost ...

1 Algorithms in Bioinformatics, University of Tübingen, Tübingen, Germany 2 International Max Planck Research School “From Molecules to Organisms”, Max Planck Institute for Biology, Tübingen, Germany ...

Researchers develop a phylogenetic package that incorporated several pandemic-specific optimization and parallelization techniques.

Phylogenomic Analysis of Glomeromycota To place Glomeromycota in relation to its sister phyla, phylogenetic trees were built from a dataset that included members of Glomeromycota, Mucoromycota and ...

According to the authors, phylogenetic network analysis can be used to study the evolutionary processes resulting in the emergence of new SARS-CoV-2 variants and several other viruses.