Inclusion of four alanines between a 16-mer peptide and a 16 carbon long aliphatic tail resulted in a secondary structure shift of the peptide headgroups from α helices to β sheets. A concomitant ...

Abstract: In this paper, we propose a hybrid RNN/HMM system for protein secondary structure prediction, where each secondary structure segment is approximated by a second-order recurrent neural ...

Contribution from the Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, and Materials Science Centre, University of Groningen, Nijenborgh 4, 9747 AG ...

These fundamental findings offer a novel mechanism by which rubrerythrin tubules encapsulate encapsulin to prevent oxidative stress in Pyrococcus furiosus. However, there are a few reasonable concerns ...

Abstract: We propose a new mathematical model for secondary structure in proteins. Our model is inspired by percolation theory on binary strings. What sets us apart from similar work on the subject is ...

Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available ...